I just started linking my AC store with QB Online. All data transfers over well. But the only big issue I am having is that the invoices do no sync well. Invoices that are paid and at $0.00 status in AC show the full invoice amount in QB Online, meaning I am having all my invoices as "unpaid" and "overdue". I need to manually change them to "paid" status. It does not make sense to me that this feature is not working well.
If you offer a syncing integration feature it needs to be accurate; you should not have to make manual corrections in order to make your data synchronized with your store. Especially not when it comes to bookkeeping and your invoice balances. Hopefully you will be able to get this fixed asap.
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